Comprehensive glycomics comparison between colon cancer cell cultures and tumours: implications for biomarker studies

PubMed Entry

GlyToucan Accession Number: G75601RG

Peak Intensity
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Y^{0,4}X_{Fuc}
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Z
364.1 2942.0

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B
364.4 2441.0

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B
382.0 2008.0

Annotations:

C
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392.3 5274.0

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B^{1,5}X_{Gal} ^{3,5}A_{Man}Z
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^{0,4}A_{Man}Z ^{1,3}A_{Man}Z ^{2,4}A_{Man}Z B^{0,2}X_{Gal}
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Annotations:

YZ ZY
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Annotations:

C^{1,5}X_{Gal}
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424.0 7435.0

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^{0,4}A_{Man}Y ^{1,3}A_{Man}Y ^{2,4}A_{Man}Y C^{0,2}X_{Gal}
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Annotations:

^{0,4}A_{Man}Y ^{1,3}A_{Man}Y ^{2,4}A_{Man}Y C^{0,2}X_{Gal}
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Annotations:

YY
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Annotations:

B^{0,3}X_{NeuAc}
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Annotations:

C
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^{0,3}A_{GlcNAc}Y
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Annotations:

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Annotations:

B
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Annotations:

Z
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Annotations:

CY
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Annotations:

Y
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Annotations:

C^{2,4}X_{NeuAc}
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Annotations:

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Annotations:

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Annotations:

YY YY
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C^{2,5}X_{NeuAc}
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Annotations:

YY YY
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Annotations:

B
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Annotations:

B
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^{1,4}A_{GlcNAc}Y ^{1,4}X_{GlcNAc}Z
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Annotations:

^{0,3}A_{Man}Y ^{1,4}A_{Man}Y ^{2,4}A_{GlcNAc}Y ^{1,5}A_{Man}Y
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Annotations:

Z^{0,2}X_{Fuc} ^{2,5}X_{GlcNAc}Z ^{2,5}X_{Gal}Z ^{2,5}A_{GlcNAc}Z ^{2,5}A_{Man}Z
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Annotations:

BY CZ
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Annotations:

BY CZ
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Annotations:

C
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Annotations:

C
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BY CZ ZZ
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Annotations:

^{1,4}A_{GlcNAc}Y Z^{3,5}X_{Fuc}
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B^{0,4}X_{NeuAc}
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Annotations:

YZ ZY
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Annotations:

C^{0,4}X_{NeuAc} ^{1,5}A_{GlcNAc}Y ^{1,5}X_{GlcNAc}Z
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Annotations:

^{0,2}A_{GlcNAc}Z
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Annotations:

^{3,5}A_{GlcNAc}Z ^{1,4}A_{GlcNAc}Y
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Annotations:

^{1,5}X_{Gal}Y ^{3,5}A_{GlcNAc}Y
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^{1,5}A_{GlcNAc}Z ^{1,5}A_{Man}Z
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BZ BZ
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Annotations:

YZ ZY
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BY CZ BY CZ
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Annotations:

^{2,4}A_{GlcNAc}Y Y^{3,5}X_{Fuc}
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Annotations:

C^{1,3}X_{NeuAc}
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Annotations:

ZZ ZZ YZ ZY
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Annotations:

ZY ZZ ZZ YZ
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^{2,5}A_{GlcNAc}Z
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Annotations:

Z
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Annotations:

YY
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Annotations:

YY
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Annotations:

^{2,5}A_{GlcNAc}Y
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Annotations:

C^{2,5}X_{GlcNAc} C^{2,5}X_{Gal} Y^{1,4}X_{GlcNAc}
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Annotations:

Z^{0,2}X_{Fuc} Z^{2,5}X_{GlcNAc} ^{2,5}A_{GlcNAc}Z
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Annotations:

B
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Annotations:

Y^{1,5}X_{Fuc} ^{0,3}A_{GlcNAc}Y ^{1,4}A_{GlcNAc}Y C^{0,3}X_{GlcNAc} C^{0,3}X_{Gal} C^{1,4}X_{Gal}
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Annotations:

^{0,3}A_{GlcNAc}Y ^{1,4}A_{GlcNAc}Y C^{0,3}X_{GlcNAc} C^{0,3}X_{Gal} C^{1,4}X_{Gal}
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Annotations:

CY
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Annotations:

C
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Annotations:

ZZ
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Annotations:

YY
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Annotations:

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Annotations:

C^{1,5}X_{NeuAc} Y^{2,5}X_{NeuAc}
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Annotations:

YY
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Annotations:

C
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Annotations:

ZZ
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C^{0,3}X_{NeuAc} Y^{2,5}X_{Fuc}
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Annotations:

BZ
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Annotations:

BY CZ
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Annotations:

BY CZ ZZ
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Annotations:

YZ ZY
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Annotations:

Y
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Y
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Annotations:

C^{3,5}X_{NeuAc} C^{1,5}X_{GlcNAc} ^{0,4}A_{Man}
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Annotations:

YZ ZY YY
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Annotations:

YY
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Annotations:

YY
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Annotations:

ZZ
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Annotations:

Y^{0,2}X_{Fuc} B^{2,4}X_{NeuAc} B^{1,3}X_{GlcNAc} Y^{2,5}X_{GlcNAc}
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Annotations:

C^{1,4}X_{NeuAc} ^{1,5}X_{GlcNAc}Y Y^{1,3}X_{GlcNAc} Y^{2,4}X_{NeuAc}
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Annotations:

Z^{1,5}X_{Fuc} Z^{0,4}X_{Fuc} Z^{1,3}X_{NeuAc}
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Annotations:

Y^{3,5}X_{Fuc} Y^{1,5}X_{NeuAc} ^{1,4}X_{GlcNAc}Y
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Annotations:

C^{0,4}X_{GlcNAc} C^{2,4}X_{GlcNAc} C^{0,4}X_{Gal} C^{1,3}X_{Gal} C^{2,4}X_{Gal} ^{0,2}X_{GlcNAc}Y ^{0,2}X_{Gal}Y ^{1,3}X_{GlcNAc}Z
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Annotations:

YY
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Annotations:

YY
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Annotations:

C^{1,3}X_{NeuAc} Y^{0,2}X_{Fuc} ^{2,5}X_{GlcNAc}Y ^{2,5}X_{Gal}Y Y^{0,3}X_{NeuAc}
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Annotations:

ZZ
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Annotations:

ZZ
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ZZ
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Z
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B
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YZ ZY
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YZ ZY
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Annotations:

YZ ZY
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Annotations:

Y
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Annotations:

^{0,3}A_{GlcNAc}Z Z^{0,4}X_{Fuc} Y^{0,3}X_{NeuAc}
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Annotations:

ZZ
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Annotations:

Z^{0,4}X_{NeuAc} ^{0,2}X_{Gal}Z
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Annotations:

YZ ZY
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Annotations:

Z^{0,2}X_{Fuc} ^{2,5}X_{Gal}Z
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Annotations:

Y^{0,4}X_{NeuAc} ^{0,2}X_{Gal}Y Z^{2,4}X_{NeuAc}
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Annotations:

^{0,2}A_{Man}Z ^{1,4}X_{GlcNAc}Z Z^{0,3}X_{Fuc} ^{3,5}X_{Gal}Z Z^{1,4}X_{NeuAc} ^{0,2}A_{GlcNAc}Z
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Annotations:

Y^{1,4}X_{Fuc} ^{0,3}X_{Gal}Y ^{1,4}X_{Gal}Y Y^{1,4}X_{GlcNAc}
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Annotations:

^{0,4}X_{NeuAc}Z ^{0,2}X_{GlcNAc}Z Z^{0,2}X_{Fuc} Z^{2,5}X_{GlcNAc} ^{0,2}X_{Gal}Z
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Annotations:

^{0,4}X_{NeuAc}Z ^{0,2}X_{GlcNAc}Z Z^{0,2}X_{Fuc} Z^{2,5}X_{GlcNAc} ^{0,2}X_{Gal}Z
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Annotations:

Z^{1,4}X_{Fuc} Z^{0,3}X_{GlcNAc}
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Annotations:

^{1,5}A_{Man}Z ^{0,4}X_{NeuAc}Y ^{0,2}X_{GlcNAc}Y Y^{0,2}X_{Fuc} ^{0,2}X_{Gal}Y Y^{2,5}X_{GlcNAc} ^{2,4}X_{NeuAc}Z ^{1,3}X_{GlcNAc}Z Z^{0,4}X_{Fuc} Z^{1,3}X_{NeuAc}
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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} ^{0,4}X_{Gal}Y ^{1,3}X_{Gal}Y ^{2,4}X_{Gal}Y Y^{2,4}X_{NeuAc} Y^{1,3}X_{GlcNAc}
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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} ^{0,4}X_{Gal}Y ^{1,3}X_{Gal}Y ^{2,4}X_{Gal}Y Y^{2,4}X_{NeuAc} Y^{1,3}X_{GlcNAc}
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Annotations:

Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} Z^{0,4}X_{GlcNAc} Z^{2,4}X_{GlcNAc}
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Annotations:

Z^{3,5}X_{Fuc} ^{3,5}X_{GlcNAc}Z ^{3,5}X_{Gal}Z
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Annotations:

Z^{1,3}X_{NeuAc} ^{0,4}X_{GlcNAc}Z ^{2,4}X_{GlcNAc}Z ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc}
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Annotations:

^{0,4}X_{GlcNAc}Z ^{2,4}X_{GlcNAc}Z ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} Z^{1,3}X_{NeuAc}
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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{0,4}X_{GlcNAc} Y^{2,4}X_{GlcNAc}
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Annotations:

Z
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Annotations:

Z
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Annotations:

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Annotations:

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Annotations:

^{0,4}X_{GlcNAc}Y ^{2,4}X_{GlcNAc}Y ^{0,4}X_{Gal}Y ^{1,3}X_{Gal}Y ^{2,4}X_{Gal}Y Y^{0,4}X_{Fuc} Y^{1,3}X_{NeuAc} ^{2,5}X_{NeuAc}
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Annotations:

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Annotations:

Y
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Annotations:

Y
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Annotations:

Z
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Z
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Annotations:

Y
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Annotations:

Y
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Annotations:

CY
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Annotations:

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Annotations:

BY CZ
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Annotations:

YY YY
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Annotations:

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Annotations:

^{0,3}A_{Man}
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Annotations:

^{0,3}A_{Man} ^{0,4}X_{GlcNAc} ^{2,4}X_{GlcNAc} ^{0,4}X_{Gal} ^{1,3}X_{Gal} ^{2,4}X_{Gal} ^{1,3}X_{Fuc} ^{2,4}X_{Fuc}
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Annotations:

^{0,3}A_{Man} ^{0,4}X_{GlcNAc} ^{2,4}X_{GlcNAc} ^{0,4}X_{Gal} ^{1,3}X_{Gal} ^{2,4}X_{Gal} ^{1,3}X_{Fuc} ^{2,4}X_{Fuc}
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Annotations:

^{0,4}X_{GlcNAc} ^{2,4}X_{GlcNAc} ^{0,4}X_{Gal} ^{1,3}X_{Gal} ^{2,4}X_{Gal} ^{1,3}X_{Fuc} ^{2,4}X_{Fuc} ^{3,5}X_{Fuc}
1111.1 10923.0

Annotations:

^{3,5}X_{Fuc}
1111.5 5831.0

Annotations:

^{3,5}X_{Fuc}
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Annotations:

^{2,4}A_{GlcNAc}Y
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Annotations:

ZZ ZZ
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Annotations:

YY YY
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Annotations:

^{2,4}A_{GlcNAc}Z ^{1,5}A_{Man}Z
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Annotations:

^{0,3}A_{GlcNAc}Y
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Annotations:

^{0,3}A_{GlcNAc}Y
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Annotations:

CY
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Annotations:

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Annotations:

^{0,2}A_{GlcNAc}Y ^{0,2}A_{Man}Y
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Annotations:

ZZ
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Annotations:

YZ ZY
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Annotations:

Y^{3,5}X_{Fuc}
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Annotations:

ZZ
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Annotations:

Z
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Annotations:

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Annotations:

Y
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Annotations:

Y
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Annotations:

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Annotations:

BZ
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Annotations:

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Annotations:

B^{1,5}X_{NeuAc} ^{0,3}A_{GlcNAc}Z
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Annotations:

BY CZ
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Annotations:

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Annotations:

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Annotations:

^{0,2}A_{GlcNAc}Z
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Annotations:

BZ BZ
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Annotations:

^{1,4}A_{GlcNAc}Z Z^{2,5}X_{NeuAc}
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Annotations:

BY CZ BY CZ
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Annotations:

^{2,4}A_{GlcNAc}Z
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Annotations:

^{1,4}A_{GlcNAc}Y Z^{3,5}X_{Fuc} Y^{2,5}X_{NeuAc}
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Annotations:

YY
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Annotations:

CY CY
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Annotations:

^{2,4}A_{GlcNAc}Y
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Annotations:

Y^{3,5}X_{Fuc}
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Annotations:

ZZ ZZ
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Annotations:

YZ ZY
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Annotations:

Y
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Annotations:

^{0,2}A_{GlcNAc}Y C^{2,4}X_{NeuAc} C^{1,3}X_{GlcNAc}
1626.7 3577.0

Annotations:

^{0,2}A_{GlcNAc}Y C^{2,4}X_{NeuAc} C^{1,3}X_{GlcNAc}
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Annotations:

Z^{0,2}X_{Fuc} Z^{2,5}X_{GlcNAc}
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Annotations:

^{2,5}A_{GlcNAc}Z
1633.8 2296.0

Annotations:

^{2,5}A_{GlcNAc}Z
1646.5 8187.0

Annotations:

ZZ
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Annotations:

^{0,2}A_{GlcNAc}Y C^{0,4}X_{GlcNAc} C^{2,4}X_{GlcNAc} C^{0,4}X_{Gal} C^{1,3}X_{Gal} C^{2,4}X_{Gal} ^{0,2}A_{Man}
1676.8 3912.0

Annotations:

Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} Z^{0,4}X_{GlcNAc} Z^{2,4}X_{GlcNAc} ^{1,5}X_{Gal}Z
1677.5 3384.0

Annotations:

ZZ
1686.3 2271.0
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1692.8 5541.0

Annotations:

Z^{1,5}X_{Fuc} Z^{0,4}X_{Fuc} Z^{1,3}X_{NeuAc}
1694.5 2120.0

Annotations:

Y^{2,4}X_{Fuc} Y^{1,3}X_{Fuc} ^{1,5}X_{Gal}Y Y^{0,4}X_{GlcNAc} Y^{2,4}X_{GlcNAc}
1696.6 2724.0

Annotations:

Y^{3,5}X_{Fuc}
1704.0 13032.0
1709.7 2982.0

Annotations:

B
1710.8 10442.0

Annotations:

Y^{1,5}X_{Fuc} Y^{0,4}X_{Fuc} Y^{1,3}X_{NeuAc}
1711.6 5655.0

Annotations:

C^{1,5}X_{NeuAc} Y^{2,5}X_{NeuAc}
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1720.3 5357.0

Annotations:

Z^{1,4}X_{Fuc} ^{0,3}X_{GlcNAc}Z ^{0,3}X_{Gal}Z ^{1,4}X_{Gal}Z
1727.7 57094.0

Annotations:

C
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Annotations:

BZ
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Annotations:

BZ
1733.8 4908.0
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Annotations:

Z
1737.6 21935.0

Annotations:

B^{3,5}X_{NeuAc} B^{1,5}X_{GlcNAc}
1750.6 3974.0

Annotations:

BY CZ
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Annotations:

BY CZ
1751.8 4312.0

Annotations:

ZZ
1752.9 7383.0

Annotations:

YZ ZY
1754.6 1497.0

Annotations:

Y
1755.8 3632.0

Annotations:

C^{3,5}X_{NeuAc} C^{1,5}X_{GlcNAc}
1768.7 12425.0

Annotations:

CY
1769.6 2510.0

Annotations:

YZ ZY
1769.9 4264.0

Annotations:

YZ ZY
1770.7 3236.0

Annotations:

YY
1771.0 2885.0

Annotations:

YY
1771.8 5162.0
1784.7 7733.0

Annotations:

Y^{0,4}X_{Fuc}
1786.7 11818.0
1788.8 3626.0
1794.6 3241.0

Annotations:

Z^{0,2}X_{Fuc} Z^{2,5}X_{GlcNAc}
1811.9 1178.0

Annotations:

B^{2,4}X_{NeuAc} B^{1,3}X_{GlcNAc}
1813.0 1119.0

Annotations:

Y^{0,2}X_{Fuc} Y^{2,5}X_{GlcNAc}
1817.7 7795.0
1829.7 9740.0

Annotations:

C^{2,4}X_{NeuAc} C^{1,3}X_{GlcNAc} ^{0,2}A_{GlcNAc}
1829.9 4610.0

Annotations:

C^{2,4}X_{NeuAc} C^{1,3}X_{GlcNAc} ^{0,2}A_{GlcNAc}
1830.6 4085.0
1831.0 3378.0
1832.5 1534.0
1833.6 3786.0
1833.8 3818.0
1838.7 1905.0

Annotations:

B^{3,5}X_{GlcNAc} B^{3,5}X_{Gal} Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} Z^{0,4}X_{GlcNAc} Z^{2,4}X_{GlcNAc} ^{1,5}X_{Gal}Z
1852.7 1019.0

Annotations:

B^{0,4}X_{GlcNAc} B^{2,4}X_{GlcNAc} B^{0,4}X_{Gal} B^{1,3}X_{Gal} B^{2,4}X_{Gal} ^{0,2}X_{GlcNAc}Z ^{0,2}X_{Gal}Z
1874.9 3873.0
1896.6 1802.0

Annotations:

ZZ
1896.9 4972.0

Annotations:

ZZ
1912.2 2027.0

Annotations:

B
1912.6 17755.0

Annotations:

B
1912.8 22177.0

Annotations:

B
1913.7 18528.0
1914.8 12358.0

Annotations:

YZ ZY
1915.8 5067.0
1916.8 1506.0

Annotations:

Y
1917.9 1536.0
1930.9 7108.0

Annotations:

C
1931.1 4539.0

Annotations:

C
1931.7 11151.0
1932.5 1049.0

Annotations:

YY
1932.8 1548.0

Annotations:

YY
1933.7 10306.0
1935.6 5186.0
1938.9 1472.0
1939.5 1257.0
1948.8 8410.0
1956.7 4088.0

Annotations:

Z^{0,2}X_{Fuc} ^{2,5}X_{Gal}Z
1991.8 10034.0
2102.8 3788.0
2193.8 3941.0

Annotations:

^{2,5}X_{Fuc}

There are 6 similar spectra:

Id Structure Score

2247

0.81

386

0.80

2274

0.74

2396

0.66

2556

0.64

2275

0.58
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