Comprehensive glycomics comparison between colon cancer cell cultures and tumours: implications for biomarker studies

PubMed Entry

GlyToucan Accession Number: G18573YO

Peak Intensity
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350.0 415.0

Annotations:

Z
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Annotations:

Z
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B^{1,4}X_{NeuAc} B^{2,4}X_{NeuAc} ^{3,5}X_{GlcNAc}Y
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364.0 289.0

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BY BY CZ CZ BY CZ
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Y
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Y
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B
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B^{0,2}X_{NeuAc}
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Annotations:

B^{2,5}X_{NeuAc} B^{0,4}X_{Gal} B^{1,3}X_{Gal} B^{2,4}X_{Gal} B^{1,3}X_{Fuc} B^{2,4}X_{Fuc}
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C
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Z^{2,4}X_{Fuc} Z^{1,3}X_{Fuc}
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B
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Z
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B^{1,5}X_{Fuc} B^{2,4}X_{NeuAc} ^{1,4}A_{GlcNAc}Z ^{1,4}A_{GlcNAc}Y
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BY CZ
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Annotations:

Y
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C^{2,4}X_{NeuAc} C^{1,5}X_{Fuc}
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Annotations:

CY
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Annotations:

YZ ZY
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Annotations:

B
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Annotations:

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Annotations:

^{1,5}A_{Man}Z ^{1,5}A_{GlcNAc}Y Y^{1,4}X_{Fuc} Y^{1,4}X_{Fuc} Y^{0,3}X_{Gal} Y^{1,4}X_{Gal}
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Annotations:

C
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ZZ ZZ ZZ
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ZZ ZZ ZZ YZ ZY
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Z
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Z
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Annotations:

Y
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Annotations:

YZ ZY
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Annotations:

Z^{2,5}X_{Fuc} ^{0,2}A_{Man}Z Z^{0,2}X_{Fuc} Z^{0,2}X_{Fuc} Z^{2,5}X_{Gal}
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Annotations:

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Annotations:

^{1,5}A_{Man}Z Z^{1,4}X_{Fuc} Z^{1,4}X_{Fuc} Z^{0,3}X_{Gal} Z^{1,4}X_{Gal} B^{0,3}X_{NeuAc} Y^{1,4}X_{Fuc}
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Annotations:

^{2,5}A_{GlcNAc}Y ^{0,4}A_{Man} C^{2,5}X_{NeuAc}
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Annotations:

YY
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YY
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Annotations:

CZ BY
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CZ BY
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CZ BY
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^{1,5}X_{NeuAc}Y Y^{0,3}X_{Fuc} Y^{0,3}X_{Fuc} Y^{3,5}X_{Gal} C^{3,5}X_{NeuAc}
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Annotations:

BY CZ
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Annotations:

CY
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Annotations:

CY
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Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
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Z
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Z
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Z
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Z Y
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Y
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C^{1,5}X_{Fuc}
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Annotations:

Y
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Annotations:

ZZ
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Annotations:

^{0,3}A_{GlcNAc}Y C^{0,3}X_{Fuc} C^{3,5}X_{Gal}
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Annotations:

^{2,4}X_{NeuAc}Y C^{3,5}X_{Fuc}
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Annotations:

^{1,4}A_{GlcNAc}Y Z^{0,3}X_{Fuc}
811.5 453.0

Annotations:

Y^{1,4}X_{Fuc} ^{1,5}A_{Man}
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Annotations:

B
818.4 1930.0

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^{1,4}A_{GlcNAc}Y Z^{3,5}X_{Fuc} Y^{1,5}X_{Gal}
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Annotations:

Y^{0,3}X_{Fuc}
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821.7 664.0
822.3 2245.0
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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{1,5}X_{Fuc} Y^{1,5}X_{Fuc} C^{1,5}X_{NeuAc}
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Annotations:

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Annotations:

C^{1,5}X_{NeuAc} Y^{3,5}X_{Fuc}
827.2 139.0

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C^{1,5}X_{NeuAc} Y^{3,5}X_{Fuc}
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Annotations:

C
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C
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BZ
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BZ
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BZ
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844.1 832.0
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Z
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Y^{0,3}X_{Fuc} Y^{3,5}X_{Gal} C^{3,5}X_{NeuAc} Y^{0,3}X_{Fuc}
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Annotations:

BY CZ
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Annotations:

CY
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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{0,4}X_{Gal} Y^{1,3}X_{Gal} Y^{2,4}X_{Gal} Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} ^{2,4}A_{GlcNAc}
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Annotations:

Y
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Annotations:

Y
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ZZ ZZ
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Annotations:

YZ ZY YZ ZY
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Annotations:

B^{2,5}X_{Fuc}
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Annotations:

^{2,4}A_{GlcNAc}Y
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Annotations:

B^{0,4}X_{Gal} B^{1,3}X_{Gal} B^{2,4}X_{Gal} B^{1,3}X_{Fuc} B^{2,4}X_{Fuc} Z^{0,2}X_{Gal} B^{3,5}X_{Fuc}
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Annotations:

B^{1,3}X_{NeuAc} Z^{0,2}X_{Fuc} Z^{0,2}X_{Fuc} Z^{2,5}X_{Gal} B^{0,4}X_{Fuc}
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Annotations:

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Annotations:

^{0,2}X_{NeuAc}Z
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Annotations:

^{1,5}A_{GlcNAc} Z^{2,5}X_{Fuc} Z^{2,5}X_{Fuc}
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Annotations:

^{2,5}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z
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Annotations:

^{2,5}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z
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926.1 172.0

Annotations:

^{0,3}X_{NeuAc}Z
929.8 1027.0

Annotations:

^{1,5}X_{NeuAc}Y ^{1,5}X_{NeuAc}Y Y^{0,3}X_{Fuc} Y^{0,3}X_{Fuc} Y^{3,5}X_{Gal}
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Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
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Annotations:

ZZ ZZ
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Annotations:

ZZ
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Annotations:

ZY YZ YZ ZY
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Annotations:

^{1,5}A_{Man}Z
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^{1,5}A_{Man}Z
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^{1,5}A_{Man}Z
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Annotations:

^{1,4}X_{Fuc}Z Z^{1,4}X_{Fuc} ^{0,3}X_{Gal}Z ^{0,3}X_{Gal}Z ^{1,4}X_{Gal}Z ^{1,4}X_{Gal}Z Z^{0,3}X_{Fuc} Z^{0,3}X_{Fuc}
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Annotations:

^{0,2}X_{Fuc}Y Y^{0,2}X_{Fuc} ^{2,5}X_{Gal}Y ^{2,5}X_{Gal}Y Y^{2,5}X_{Fuc} Y^{2,5}X_{Fuc}
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Annotations:

Z^{2,4}X_{Fuc} ^{1,5}A_{GlcNAc}Z Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} Z^{1,3}X_{Fuc}
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Annotations:

Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{Fuc}Z ^{2,4}X_{Fuc}Z ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{NeuAc}Z
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Annotations:

Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{Fuc}Z ^{2,4}X_{Fuc}Z ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{NeuAc}Z
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Annotations:

Z^{1,3}X_{Fuc} Z^{2,4}X_{Fuc} ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{Fuc}Z ^{2,4}X_{Fuc}Z ^{0,4}X_{Gal}Z ^{1,3}X_{Gal}Z ^{2,4}X_{Gal}Z Z^{0,4}X_{Fuc} ^{1,3}X_{NeuAc}Z
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Annotations:

^{3,5}X_{Fuc}Z Z^{3,5}X_{Fuc} Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} ^{0,2}X_{NeuAc}
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Annotations:

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Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} ^{0,4}X_{Gal}Y ^{1,3}X_{Gal}Y ^{2,4}X_{Gal}Y ^{1,3}X_{Fuc}Y ^{2,4}X_{Fuc}Y ^{0,4}X_{Gal}Y ^{1,3}X_{Gal}Y ^{2,4}X_{Gal}Y Y^{0,4}X_{Fuc} Y^{0,4}X_{Fuc} ^{1,3}X_{NeuAc}Y ^{2,5}X_{NeuAc} ^{1,5}A_{GlcNAc}Y
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Annotations:

^{2,5}X_{NeuAc} ^{1,5}A_{GlcNAc}Y ^{3,5}X_{Fuc}Y Y^{3,5}X_{Fuc}
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Annotations:

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Annotations:

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BZ
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Annotations:

Z
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Annotations:

Z Z
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Annotations:

Y
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Annotations:

Y
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Annotations:

BY CZ
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Annotations:

YZ ZY
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Annotations:

^{0,3}A_{GlcNAc}Z
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Annotations:

CY
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Annotations:

^{2,4}X_{NeuAc}
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Annotations:

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Annotations:

^{0,2}A_{GlcNAc}Z ^{0,2}A_{Man}Z ^{1,3}X_{Fuc} ^{2,4}X_{Fuc} ^{1,3}X_{Fuc} ^{2,4}X_{Fuc} ^{0,4}X_{Gal} ^{1,3}X_{Gal} ^{2,4}X_{Gal}
1082.1 1096.0

Annotations:

^{1,3}X_{Fuc} ^{2,4}X_{Fuc} ^{0,4}X_{Gal} ^{1,3}X_{Gal} ^{1,3}X_{Fuc} ^{2,4}X_{Fuc} ^{2,4}X_{Gal} ^{2,5}A_{GlcNAc}Z
1082.5 4199.0

Annotations:

^{2,5}A_{GlcNAc}Z ^{3,5}X_{Fuc} ^{3,5}X_{Fuc}
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Annotations:

^{1,4}A_{GlcNAc}Z
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Annotations:

^{0,2}A_{GlcNAc}Y ^{0,2}A_{Man}Y
1099.5 999.0

Annotations:

^{0,2}A_{GlcNAc}Y ^{0,2}A_{Man}Y
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Annotations:

CY
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Annotations:

CY
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Annotations:

^{2,4}A_{GlcNAc}Y
1201.6 1728.0

Annotations:

^{2,4}A_{GlcNAc}Y
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1203.6 388.0
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1221.6 1549.0
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Annotations:

ZZ ZZ ZZ ZZ
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1241.3 1339.0

Annotations:

^{2,4}A_{GlcNAc}Z
1241.5 271.0

Annotations:

^{2,4}A_{GlcNAc}Z
1242.5 362.0

Annotations:

YZ YZ ZY YZ ZY YZ ZY ZY
1244.5 443.0

Annotations:

YY
1245.5 947.0

Annotations:

^{2,5}A_{GlcNAc}Y
1259.7 550.0

Annotations:

^{2,4}A_{GlcNAc}Y
1261.4 3217.0

Annotations:

^{0,2}A_{GlcNAc}Y
1285.2 491.0

Annotations:

^{2,5}A_{Man}Z ^{2,5}A_{GlcNAc}Z
1285.6 327.0

Annotations:

^{2,5}A_{GlcNAc}Z ^{2,5}A_{Man}Z
1286.7 799.0

Annotations:

Y^{0,2}X_{Gal}
1297.7 527.0
1298.9 315.0

Annotations:

^{1,5}A_{GlcNAc}Z Z^{1,4}X_{Fuc} Z^{1,4}X_{Fuc} Z^{0,3}X_{Gal} Z^{1,4}X_{Gal}
1302.4 507.0

Annotations:

Y^{0,2}X_{Fuc} Y^{0,2}X_{Fuc} Y^{2,5}X_{Gal}
1302.6 369.0

Annotations:

Y^{0,2}X_{Fuc} Y^{0,2}X_{Fuc} Y^{2,5}X_{Gal}
1303.4 728.0

Annotations:

^{2,5}A_{GlcNAc}Y ^{2,5}A_{Man}Y
1303.6 524.0

Annotations:

^{2,5}A_{GlcNAc}Y ^{2,5}A_{Man}Y
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Annotations:

BY CZ
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Annotations:

^{2,5}X_{NeuAc}Y Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{0,4}X_{Gal} Y^{1,3}X_{Gal} Y^{2,4}X_{Gal} Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc}
1348.3 1199.0

Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
1356.6 1170.0

Annotations:

^{1,5}A_{GlcNAc}Z
1362.6 1301.0

Annotations:

CY
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1363.7 1288.0
1364.4 782.0
1367.3 870.0
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Annotations:

ZZ
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Annotations:

ZZ
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1382.1 446.0
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1401.6 634.0
1404.5 436.0

Annotations:

YZ ZY YZ YZ ZY ZY
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Annotations:

YY
1406.5 738.0

Annotations:

Y
1411.6 272.0
1421.6 633.0

Annotations:

^{2,4}A_{GlcNAc}Y
1422.7 463.0

Annotations:

YY YY YY
1426.6 973.0
1428.7 253.0
1431.0 294.0

Annotations:

Z^{0,2}X_{Gal} B^{0,2}X_{NeuAc}
1439.5 845.0
1443.4 469.0

Annotations:

Z^{1,4}X_{Fuc}
1447.7 367.0

Annotations:

B^{2,5}X_{NeuAc} ^{2,5}A_{GlcNAc}Z Y^{0,2}X_{Fuc}
1453.6 152.0
1454.2 1040.0
1464.9 426.0

Annotations:

^{0,2}A_{Man}Y Y^{0,2}X_{Fuc} Y^{0,2}X_{Fuc} Y^{2,5}X_{Gal}
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1470.8 800.0
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1503.6 223.0
1508.7 1111.0

Annotations:

CY
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1510.7 561.0

Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
1512.8 506.0
1527.4 464.0
1529.7 325.0
1530.6 565.0
1533.6 1365.0

Annotations:

Z
1534.6 178.0

Annotations:

B^{1,5}X_{Fuc}
1545.6 411.0
1547.6 723.0
1547.8 198.0
1548.6 148.0

Annotations:

^{2,4}A_{GlcNAc}Z B^{0,2}X_{Fuc} B^{2,5}X_{Gal}
1549.5 1386.0

Annotations:

YZ ZY
1549.8 1252.0

Annotations:

YZ ZY
1550.5 486.0

Annotations:

Z
1550.8 854.0

Annotations:

Z
1551.5 1311.0

Annotations:

Y
1551.8 745.0

Annotations:

Y
1565.6 946.0
1568.8 293.0

Annotations:

Y
1569.6 394.0

Annotations:

C^{2,4}X_{NeuAc}
1570.6 2491.0
1573.8 694.0

Annotations:

ZZ
1574.7 276.0
1576.6 422.0

Annotations:

^{2,5}A_{GlcNAc}Z
1580.7 1399.0

Annotations:

^{0,3}A_{GlcNAc}Y ^{3,5}A_{GlcNAc}Y C^{1,4}X_{Fuc} C^{0,3}X_{Gal} C^{1,4}X_{Gal} ^{1,4}X_{NeuAc}Z
1585.7 1078.0
1586.8 949.0
1590.9 394.0
1592.5 519.0

Annotations:

^{0,2}A_{GlcNAc}Z ^{2,5}A_{GlcNAc}Z B^{0,4}X_{Gal} B^{1,3}X_{Gal} B^{2,4}X_{Gal} B^{1,3}X_{Fuc} B^{2,4}X_{Fuc}
1608.4 482.0

Annotations:

^{0,2}A_{GlcNAc}Z B^{0,4}X_{Fuc} B^{1,3}X_{NeuAc}
1610.6 316.0

Annotations:

C^{2,4}X_{Fuc} ^{0,2}A_{Man} ^{2,5}A_{GlcNAc}Y C^{0,4}X_{Gal} C^{1,3}X_{Gal} C^{2,4}X_{Gal} ^{0,2}A_{GlcNAc}Y C^{1,3}X_{Fuc}
1613.8 924.0
1619.0 314.0
1652.7 1665.0

Annotations:

B
1653.8 996.0

Annotations:

Y^{1,3}X_{Fuc} Y^{2,4}X_{Fuc} Y^{1,5}X_{Fuc} Y^{1,5}X_{Fuc}
1656.0 1103.0

Annotations:

Y^{3,5}X_{Fuc}
1656.8 690.0
1670.5 1166.0

Annotations:

C
1671.1 1413.0
1671.6 3347.0
1672.0 659.0
1672.5 3514.0
1673.4 323.0
1673.6 2298.0
1674.8 402.0
1676.3 342.0
1677.0 604.0
1678.3 768.0
1693.4 811.0

Annotations:

CZ BY
1693.7 1570.0

Annotations:

CZ BY
1694.6 669.0
1695.0 439.0
1696.5 533.0
1696.9 1583.0
1698.8 237.0

Annotations:

C^{3,5}X_{NeuAc}
1699.6 843.0
1709.9 892.0

Annotations:

BY CZ
1710.5 364.0
1712.1 1025.0

Annotations:

CY
1712.8 2002.0

Annotations:

^{2,4}A_{GlcNAc}
1713.6 2124.0

Annotations:

Y
1714.6 2227.0
1714.8 1802.0
1715.7 1112.0
1715.9 2572.0
1716.9 2065.0
1717.8 1265.0
1726.6 354.0

Annotations:

^{3,5}A_{GlcNAc}
1755.0 529.0

Annotations:

B^{2,4}X_{NeuAc}
1764.7 341.0
1769.6 505.0

Annotations:

YZ YZ ZY ZY
1772.8 1595.0

Annotations:

C^{2,4}X_{NeuAc} ^{0,2}A_{GlcNAc}
1774.6 258.0
1797.6 690.0

Annotations:

B^{3,5}X_{Fuc} Z^{1,5}X_{Fuc} Z^{1,5}X_{Fuc}
1804.8 843.0
1821.9 287.0
1839.5 282.0

Annotations:

^{2,5}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z
1839.7 292.0

Annotations:

^{2,5}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z ^{0,2}X_{NeuAc}Z
1855.8 4070.0

Annotations:

B
1856.8 2632.0
1857.6 2274.0

Annotations:

^{0,2}X_{NeuAc}Y ^{0,2}X_{NeuAc}Y ^{2,5}X_{NeuAc}Y Z^{3,5}X_{Fuc} Z^{3,5}X_{Fuc}
1857.9 2387.0

Annotations:

^{0,2}X_{NeuAc}Y ^{0,2}X_{NeuAc}Y ^{2,5}X_{NeuAc}Y Z^{3,5}X_{Fuc} Z^{3,5}X_{Fuc}
1858.6 382.0
1859.9 229.0

Annotations:

^{1,5}X_{NeuAc}Y ^{1,5}X_{NeuAc}Y Y^{0,3}X_{Fuc} Y^{0,3}X_{Fuc} Y^{3,5}X_{Gal}
1873.7 1468.0

Annotations:

C
1874.6 1021.0
1875.6 327.0

Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
1876.0 794.0

Annotations:

Y^{3,5}X_{Fuc} Y^{3,5}X_{Fuc}
1876.6 633.0
1880.8 2578.0

Annotations:

ZZ ZZ
1881.8 3437.0
1882.6 712.0
1882.8 1168.0
1883.5 343.0
1917.6 493.0
1929.4 761.0

Annotations:

^{1,4}X_{NeuAc}Z
1933.0 435.0

Annotations:

YY
1933.8 1085.0

Annotations:

Y
1934.8 929.0
1936.0 627.0
1936.6 148.0

There are 3 similar spectra:

Id Structure Score

382

0.77

380

0.77

2389

0.65
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